Modify the HCL_ProcessReadings() function to try to always provide
a valid sample. Instead of dropping a sample outside of the expected
delay, provide its assumed quality level as a small integer (relative to
already accumulated samples), and let the caller decide what quality is
acceptable.
Move processing of PHC readings from sys_linux to hwclock, where
statistics can be collected and filtering improved.
In the PHC refclock driver accumulate the samples even if not in the
external timestamping mode to update the context which will be needed
for improved filtering.
